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Europium in PDB 2yat: Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex

Protein crystallography data

The structure of Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex, PDB code: 2yat was solved by M.J.Li, H.M.Greenblatt, O.Dym, S.Albeck, H.Degani, J.L.Sussman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.893 / 2.60
Space group P 32 1 2
Cell size a, b, c (Å), α, β, γ (°) 64.693, 64.693, 133.345, 90.00, 90.00, 120.00
R / Rfree (%) 18.21 / 22.77

Europium Binding Sites:

The binding sites of Europium atom in the Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex (pdb code 2yat). This binding sites where shown within 5.0 Angstroms radius around Europium atom.
In total only one binding site of Europium was determined in the Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex, PDB code: 2yat:

Europium binding site 1 out of 1 in 2yat

Go back to Europium Binding Sites List in 2yat
Europium binding site 1 out of 1 in the Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex


Mono view


Stereo pair view

A full contact list of Europium with other atoms in the Eu binding site number 1 of Crystal Structure of Estradiol Derived Metal Chelate and Estrogen Receptor-Ligand Binding Domain Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Eu1550

b:95.8
occ:1.00
O3 A:EEU1549 2.5 73.6 1.0
O6 A:EEU1549 2.5 91.4 1.0
O4 A:EEU1549 2.5 0.3 1.0
O5 A:EEU1549 2.5 0.1 1.0
N2 A:EEU1549 2.6 94.3 1.0
N1 A:EEU1549 2.6 0.7 1.0
N3 A:EEU1549 2.7 0.1 1.0
C32 A:EEU1549 3.2 79.3 1.0
C29 A:EEU1549 3.2 98.0 1.0
C35 A:EEU1549 3.2 95.9 1.0
C28 A:EEU1549 3.3 86.2 1.0
C33 A:EEU1549 3.3 0.2 1.0
C31 A:EEU1549 3.4 0.8 1.0
C34 A:EEU1549 3.4 0.9 1.0
C24 A:EEU1549 3.4 0.1 1.0
C30 A:EEU1549 3.6 0.4 1.0
C26 A:EEU1549 3.6 97.5 1.0
C25 A:EEU1549 3.6 0.3 1.0
C27 A:EEU1549 3.6 0.9 1.0
O7 A:EEU1549 4.4 79.7 1.0
O10 A:EEU1549 4.5 96.6 1.0
O8 A:EEU1549 4.5 0.5 1.0
O9 A:EEU1549 4.6 0.6 1.0
C22 A:EEU1549 4.6 0.6 1.0

Reference:

M.J.Li, H.M.Greenblatt, O.Dym, S.Albeck, A.Pais, C.Gunanathan, D.Milstein, H.Degani, J.L.Sussman. Structure of Estradiol Metal Chelate and Estrogen Receptor Complex: the Basis For Designing A New Class of Selective Estrogen Receptor Modulators. J.Med.Chem. V. 54 3575 2011.
ISSN: ISSN 0022-2623
PubMed: 21473635
DOI: 10.1021/JM200192Y
Page generated: Sun Dec 13 11:27:47 2020

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