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Europium in PDB 4bad: Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution.

Enzymatic activity of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution.

All present enzymatic activity of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution.:
3.2.1.17;

Protein crystallography data

The structure of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution., PDB code: 4bad was solved by R.Talon, R.Kahn, A.Gautier, L.Nauton, E.Girard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.77 / 1.35
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.403, 77.403, 38.473, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 17.2

Other elements in 4bad:

The structure of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution. also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms
Sodium (Na) 2 atoms

Europium Binding Sites:

The binding sites of Europium atom in the Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution. (pdb code 4bad). This binding sites where shown within 5.0 Angstroms radius around Europium atom.
In total 2 binding sites of Europium where determined in the Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution., PDB code: 4bad:
Jump to Europium binding site number: 1; 2;

Europium binding site 1 out of 2 in 4bad

Go back to Europium Binding Sites List in 4bad
Europium binding site 1 out of 2 in the Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution.


Mono view


Stereo pair view

A full contact list of Europium with other atoms in the Eu binding site number 1 of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Eu1141

b:13.8
occ:0.65
O3 A:HM61131 2.5 13.3 0.7
O1 A:HM61131 2.5 14.9 0.7
O3 A:HM61144 2.5 13.9 0.7
N1 A:HM61144 2.5 15.2 0.7
N1 A:HM61130 2.5 16.1 0.7
N1 A:HM61131 2.5 11.8 0.7
O1 A:HM61144 2.5 16.3 0.7
O1 A:HM61130 2.6 20.8 0.7
O3 A:HM61130 2.8 15.3 0.7
C7 A:HM61131 3.3 13.8 0.7
C7 A:HM61144 3.3 14.7 0.7
C6 A:HM61131 3.4 11.4 0.7
C2 A:HM61130 3.4 19.5 0.7
C1 A:HM61131 3.4 12.8 0.7
C1 A:HM61130 3.4 22.6 0.7
C1 A:HM61144 3.4 18.7 0.7
C6 A:HM61144 3.4 15.7 0.7
C2 A:HM61144 3.4 17.7 0.7
C6 A:HM61130 3.4 16.3 0.7
C2 A:HM61131 3.4 12.4 0.7
C7 A:HM61130 3.5 15.1 0.7
O A:HOH2054 4.4 27.6 1.0
O4 A:HM61131 4.5 15.0 0.7
O4 A:HM61144 4.5 15.8 0.7
O2 A:HM61131 4.6 16.2 0.7
O2 A:HM61144 4.6 20.6 0.7
O A:HOH2011 4.6 14.7 1.0
O2 A:HM61130 4.6 26.4 0.7
C5 A:HM61131 4.7 11.8 0.7
C5 A:HM61144 4.7 17.1 0.7
C3 A:HM61130 4.7 20.8 0.7
O A:HOH2157 4.7 30.7 1.0
C5 A:HM61130 4.7 16.5 0.7
O4 A:HM61130 4.7 15.2 0.7
C3 A:HM61144 4.8 18.8 0.7
C3 A:HM61131 4.8 11.8 0.7

Europium binding site 2 out of 2 in 4bad

Go back to Europium Binding Sites List in 4bad
Europium binding site 2 out of 2 in the Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution.


Mono view


Stereo pair view

A full contact list of Europium with other atoms in the Eu binding site number 2 of Hen Egg-White Lysozyme Structure in Complex with the Europium Tris- Hydroxymethyltriazoledipicolinate Complex at 1.35 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Eu1143

b:21.9
occ:0.36
O1 A:HM61142 2.3 21.5 0.4
N1 A:HM61142 2.6 18.1 0.4
O3 A:HM61142 2.6 17.2 0.4
O A:HOH2156 2.6 41.2 1.0
C1 A:HM61142 3.2 20.0 0.4
C2 A:HM61142 3.4 17.5 0.4
C6 A:HM61142 3.4 16.7 0.4
C7 A:HM61142 3.4 17.3 0.4
O A:HOH2089 4.3 19.4 1.0
O2 A:HM61142 4.3 22.1 0.4
O A:HOH2093 4.5 34.5 1.0
O4 A:HM61142 4.7 16.2 0.4
C5 A:HM61142 4.7 16.4 0.4
C3 A:HM61142 4.7 16.7 0.4
O A:ALA107 4.8 12.7 1.0

Reference:

R.Talon, L.Nauton, J.Canet, R.Kahn, E.Girard, A.Gautier. Clicked Europium Dipicolinate Complexes For Protein X-Ray Structure Determination. Chem.Commun.(Camb.) V. 48 11886 2012.
ISSN: ISSN 1359-7345
PubMed: 23123834
DOI: 10.1039/C2CC36982F
Page generated: Sun Dec 13 11:27:50 2020

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