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Europium in PDB 9c8z: X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land

Protein crystallography data

The structure of X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land, PDB code: 9c8z was solved by J.J.Jung, C.-Y.Lin, A.K.Boal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.98 / 1.41
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 78.334, 78.334, 78.334, 90, 90, 90
R / Rfree (%) 19.7 / 20.5

Europium Binding Sites:

The binding sites of Europium atom in the X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land (pdb code 9c8z). This binding sites where shown within 5.0 Angstroms radius around Europium atom.
In total only one binding site of Europium was determined in the X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land, PDB code: 9c8z:

Europium binding site 1 out of 1 in 9c8z

Go back to Europium Binding Sites List in 9c8z
Europium binding site 1 out of 1 in the X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land


Mono view


Stereo pair view

A full contact list of Europium with other atoms in the Eu binding site number 1 of X-Ray Crystal Structure of Methylorubrum Extorquens Eu(III)-Bound Land within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Eu101

b:10.7
occ:0.50
OE2 A:GLU75 2.4 17.9 1.0
OE1 A:GLU73 2.4 14.0 1.0
OE1 A:GLU70 2.5 13.5 1.0
OE2 A:GLU70 2.6 13.7 1.0
CD A:GLU70 2.9 13.0 1.0
CD A:GLU75 3.5 17.7 1.0
CD A:GLU73 3.6 13.8 1.0
OE2 A:GLU73 4.1 13.9 1.0
OE1 A:GLU78 4.1 20.4 0.5
OE1 A:GLU75 4.3 17.9 1.0
CG A:GLU75 4.3 16.6 1.0
CG A:GLU70 4.4 12.5 1.0
NH2 A:ARG69 4.7 15.1 1.0
CG A:GLU73 4.8 13.5 1.0
NE A:ARG69 4.8 13.4 1.0
CB A:GLU73 4.9 13.5 1.0
CB A:GLU75 4.9 15.9 1.0

Reference:

W.B.Larrinaga, J.J.Jung, C.-Y.Lin, A.K.Boal, J.A.Cotruvo. Modulating Metal-Centered Dimerization of A Lanthanide Chaperone Protein For Separation of Light Lanthanides To Be Published.
Page generated: Thu Oct 31 19:44:13 2024

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